Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00512700 | CKAN_00685600 | A0A3S3Q129 | A0A3S3MEG7 | Mitochondrial Rho GTPase. | Stromal processing peptidase, chloroplastic isoform X1. | 0.589 |
CKAN_00512700 | CKAN_00947100 | A0A3S3Q129 | A0A443NQN4 | Mitochondrial Rho GTPase. | Ubiquitin-60S ribosomal protein L40-like protein. | 0.483 |
CKAN_00512700 | CKAN_01661100 | A0A3S3Q129 | A0A3S3PCC1 | Mitochondrial Rho GTPase. | Ubiquitin-60S ribosomal protein L40-like protein. | 0.483 |
CKAN_00512700 | CKAN_01793500 | A0A3S3Q129 | A0A443PDQ1 | Mitochondrial Rho GTPase. | Ubiquitin-60S ribosomal protein L40 isoform X1. | 0.483 |
CKAN_00685600 | CKAN_00512700 | A0A3S3MEG7 | A0A3S3Q129 | Stromal processing peptidase, chloroplastic isoform X1. | Mitochondrial Rho GTPase. | 0.589 |
CKAN_00685600 | CKAN_00947100 | A0A3S3MEG7 | A0A443NQN4 | Stromal processing peptidase, chloroplastic isoform X1. | Ubiquitin-60S ribosomal protein L40-like protein. | 0.782 |
CKAN_00685600 | CKAN_00982100 | A0A3S3MEG7 | A0A3S3MCN2 | Stromal processing peptidase, chloroplastic isoform X1. | Polyubiquitin-like protein. | 0.548 |
CKAN_00685600 | CKAN_00982200 | A0A3S3MEG7 | A0A3S3N5E1 | Stromal processing peptidase, chloroplastic isoform X1. | Ubiquitin, related. | 0.548 |
CKAN_00685600 | CKAN_01661100 | A0A3S3MEG7 | A0A3S3PCC1 | Stromal processing peptidase, chloroplastic isoform X1. | Ubiquitin-60S ribosomal protein L40-like protein. | 0.782 |
CKAN_00685600 | CKAN_01793500 | A0A3S3MEG7 | A0A443PDQ1 | Stromal processing peptidase, chloroplastic isoform X1. | Ubiquitin-60S ribosomal protein L40 isoform X1. | 0.782 |
CKAN_00685600 | CKAN_02268700 | A0A3S3MEG7 | A0A3S3N0C3 | Stromal processing peptidase, chloroplastic isoform X1. | Polyubiquitin 3. | 0.548 |
CKAN_00685600 | CKAN_02301700 | A0A3S3MEG7 | A0A3S3NT13 | Stromal processing peptidase, chloroplastic isoform X1. | Mitochondrial Rho GTPase. | 0.589 |
CKAN_00685600 | CKAN_02319400 | A0A3S3MEG7 | A0A3S3NFA4 | Stromal processing peptidase, chloroplastic isoform X1. | 2-hydroxyacyl-CoA lyase; Belongs to the TPP enzyme family. | 0.608 |
CKAN_00685600 | CKAN_02441400 | A0A3S3MEG7 | A0A443PWE7 | Stromal processing peptidase, chloroplastic isoform X1. | Peroxisome biogenesis protein 5. | 0.661 |
CKAN_00947100 | CKAN_00512700 | A0A443NQN4 | A0A3S3Q129 | Ubiquitin-60S ribosomal protein L40-like protein. | Mitochondrial Rho GTPase. | 0.483 |
CKAN_00947100 | CKAN_00685600 | A0A443NQN4 | A0A3S3MEG7 | Ubiquitin-60S ribosomal protein L40-like protein. | Stromal processing peptidase, chloroplastic isoform X1. | 0.782 |
CKAN_00947100 | CKAN_00982100 | A0A443NQN4 | A0A3S3MCN2 | Ubiquitin-60S ribosomal protein L40-like protein. | Polyubiquitin-like protein. | 0.909 |
CKAN_00947100 | CKAN_00982200 | A0A443NQN4 | A0A3S3N5E1 | Ubiquitin-60S ribosomal protein L40-like protein. | Ubiquitin, related. | 0.916 |
CKAN_00947100 | CKAN_02268700 | A0A443NQN4 | A0A3S3N0C3 | Ubiquitin-60S ribosomal protein L40-like protein. | Polyubiquitin 3. | 0.916 |
CKAN_00947100 | CKAN_02301700 | A0A443NQN4 | A0A3S3NT13 | Ubiquitin-60S ribosomal protein L40-like protein. | Mitochondrial Rho GTPase. | 0.483 |
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