STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_008408004-diphosphocytidyl-2-C-methyl-D-erythritol kinase. (403 aa)    
Predicted Functional Partners:
CKAN_01853700
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase.
 
 
 0.969
CKAN_01936100
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic.
  
 
 0.962
CKAN_01585800
Aspartate/glutamate/uridylate kinase.
    
 0.833
CKAN_01714100
EF-hand domain-containing protein.
   
 
 0.763
CKAN_02246400
Putative calcium-binding protein CML20.
   
 
 0.763
CKAN_02282800
EF-hand domain-containing protein.
   
 
 0.763
CKAN_01550900
Calcium-binding protein KIC-like protein.
   
 
 0.763
CKAN_01714500
EF-hand domain-containing protein.
   
 
 0.763
CKAN_01844700
Calcium-binding protein KIC.
   
 
 0.763
CKAN_01915400
Red chlorophyll catabolite reductase, chloroplastic.
   
 
 0.763
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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