STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00193900Cysteine protease. (485 aa)    
Predicted Functional Partners:
CKAN_02450700
Autophagy-related protein.
  
 0.991
CKAN_01745600
Autophagy-related protein.
  
 0.991
CKAN_01559000
Autophagy-related protein.
  
 0.990
CKAN_01888900
Autophagy-related protein.
  
 0.990
CKAN_01667500
Serine/threonine-protein kinase ATG1a-like protein isoform X2.
   
 
 0.945
CKAN_02122600
Serine/threonine-protein kinase ATG1c.
   
 
 0.945
CKAN_01561400
Autophagy-related protein 3.
   
 
 0.862
CKAN_00260700
Protein NBR1.
    
 
 0.720
CKAN_02573400
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
   
 
 0.641
CKAN_00378000
WD40 repeat.
   
 
 0.586
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.