STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00903300Coenzyme Q-binding protein COQ10, mitochondrial. (253 aa)    
Predicted Functional Partners:
CKAN_01009500
Kynurenine formamidase.
    
  0.888
CKAN_02223200
Protein ABC transporter 1, mitochondrial-like protein.
    
 
 0.841
CKAN_00012500
Putative hydroxyacylglutathione hydrolase 2, chloroplastic.
  
 
 0.829
CKAN_00917100
Lactamase_B domain-containing protein.
  
 
 0.829
CKAN_01422300
Lactamase_B domain-containing protein.
  
 
 0.829
CKAN_01815600
Beta-lactamase-like protein.
  
 
 0.829
CKAN_02760500
Hydroxyacylglutathione hydrolase cytoplasmic.
  
 
 0.829
CKAN_01504600
3-oxoacyl-acyl-carrier-protein synthase I, chloroplastic-like protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
 0.811
CKAN_00462400
3-oxoacyl-acyl-carrier-protein synthase II, chloroplastic-like protein isoform X1.
    
 0.811
CKAN_00803400
3-oxoacyl-acyl-carrier-protein synthase II, chloroplastic-like protein isoform X1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
 0.811
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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