Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CKAN_00961700 | CKAN_01326200 | A0A3S3MJ54 | A0A443P103 | Photosystem II reaction center W protein, chloroplastic. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.871 |
| CKAN_00961700 | CKAN_02010800 | A0A3S3MJ54 | A0A3S3QV14 | Photosystem II reaction center W protein, chloroplastic. | Oxygen-evolving enhancer protein 3-2, chloroplastic-like protein. | 0.903 |
| CKAN_00961700 | CKAN_02194400 | A0A3S3MJ54 | A0A3S3NI53 | Photosystem II reaction center W protein, chloroplastic. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.901 |
| CKAN_00961700 | CKAN_02737300 | A0A3S3MJ54 | A0A443Q4E5 | Photosystem II reaction center W protein, chloroplastic. | Cytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | 0.865 |
| CKAN_00961700 | CKAN_02737400 | A0A3S3MJ54 | A0A3S3N9C7 | Photosystem II reaction center W protein, chloroplastic. | Cytochrome b559 subunit alpha. | 0.909 |
| CKAN_00961700 | CKAN_02738200 | A0A3S3MJ54 | A0A3S3PBZ6 | Photosystem II reaction center W protein, chloroplastic. | Putative Photosystem II D2 protein. | 0.879 |
| CKAN_00961700 | CKAN_02750400 | A0A3S3MJ54 | A0A443Q4W9 | Photosystem II reaction center W protein, chloroplastic. | Photosystem II protein I chloroplast. | 0.891 |
| CKAN_00961700 | CKAN_02764000 | A0A3S3MJ54 | A0A3S3NT06 | Photosystem II reaction center W protein, chloroplastic. | Photosystem II protein D1; Belongs to the reaction center PufL/M/PsbA/D family. | 0.937 |
| CKAN_00961700 | CKAN_02782400 | A0A3S3MJ54 | A0A3S3PV62 | Photosystem II reaction center W protein, chloroplastic. | Cytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | 0.865 |
| CKAN_00961700 | psbD | A0A3S3MJ54 | A0A0U2F348 | Photosystem II reaction center W protein, chloroplastic. | Photosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex. | 0.879 |
| CKAN_01326200 | CKAN_00961700 | A0A443P103 | A0A3S3MJ54 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Photosystem II reaction center W protein, chloroplastic. | 0.871 |
| CKAN_01326200 | CKAN_02010800 | A0A443P103 | A0A3S3QV14 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Oxygen-evolving enhancer protein 3-2, chloroplastic-like protein. | 0.930 |
| CKAN_01326200 | CKAN_02194400 | A0A443P103 | A0A3S3NI53 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.990 |
| CKAN_01326200 | CKAN_02737300 | A0A443P103 | A0A443Q4E5 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Cytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | 0.881 |
| CKAN_01326200 | CKAN_02737400 | A0A443P103 | A0A3S3N9C7 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Cytochrome b559 subunit alpha. | 0.933 |
| CKAN_01326200 | CKAN_02738200 | A0A443P103 | A0A3S3PBZ6 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Putative Photosystem II D2 protein. | 0.951 |
| CKAN_01326200 | CKAN_02750400 | A0A443P103 | A0A443Q4W9 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Photosystem II protein I chloroplast. | 0.855 |
| CKAN_01326200 | CKAN_02764000 | A0A443P103 | A0A3S3NT06 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Photosystem II protein D1; Belongs to the reaction center PufL/M/PsbA/D family. | 0.972 |
| CKAN_01326200 | CKAN_02782400 | A0A443P103 | A0A3S3PV62 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Cytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | 0.881 |
| CKAN_01326200 | psbD | A0A443P103 | A0A0U2F348 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Photosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex. | 0.951 |
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