STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00998800Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Belongs to the ferritin family. (269 aa)    
Predicted Functional Partners:
CKAN_01937900
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.902
CKAN_02173700
Putative inactive heme oxygenase 2, chloroplastic.
    
 0.802
CKAN_00586500
Heme oxygenase 1, chloroplastic.
    
 0.802
CKAN_01184400
Heme oxygenase 1, chloroplastic.
    
 0.802
CKAN_01239800
2-Cys peroxiredoxin BAS1, chloroplastic-like protein.
  
  
 0.667
CKAN_02369000
1-Cys peroxiredoxin.
  
  
 0.667
CKAN_02650700
2-Cys peroxiredoxin BAS1, chloroplastic-like protein.
  
  
 0.667
CKAN_02735300
1-Cys peroxiredoxin.
  
  
 0.667
CKAN_02447700
Rubredoxin-like protein.
  
  
 0.609
CKAN_00360100
Ribosomal protein S16.
  
    0.528
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
Server load: low (28%) [HD]