STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00730300Lactosylceramide 4-alpha-galactosyltransferase-like protein. (418 aa)    
Predicted Functional Partners:
CKAN_02513100
Beta galactosidase small chain/ domain-containing protein; Belongs to the glycosyl hydrolase 2 family.
     
 0.877
CKAN_02611100
Beta-hexosaminidase.
   
 
  0.872
CKAN_01064900
Alpha 1,4-glycosyltransferase domain-containing protein.
  
  
 
0.846
CKAN_00202500
Beta-hexosaminidase.
   
 
  0.777
CKAN_00619200
Glycoside hydrolase family 20.
   
 
  0.777
CKAN_00618700
Beta-hexosaminidase.
   
 
  0.777
CKAN_02303200
Mannosylglycoprotein endo-beta-mannosidase.
     
 0.762
CKAN_01946000
Alpha-galactosidase.
     
 0.739
CKAN_02143400
Alpha-galactosidase.
     
 0.739
CKAN_01329700
Alpha-galactosidase.
     
 0.739
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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