STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01554900BEACH domain-containing protein. (2937 aa)    
Predicted Functional Partners:
CKAN_00318500
Guanylate kinase 2, chloroplastic/mitochondrial.
    
 0.553
CKAN_01155600
Guanylate kinase 2-like protein.
    
 0.553
CKAN_02272500
UHRF1-binding protein 1-like protein.
  
  
 0.520
CKAN_01492600
Uncharacterized protein.
  
     0.484
CKAN_01959400
Protein NAP1.
  
  
  0.456
CKAN_00100500
Microtubule-associated protein futsch isoform X1.
  
 
  0.448
CKAN_01281600
Thyroid adenoma-associated protein.
  
     0.448
CKAN_00383100
Serine/threonine-protein kinase TIO.
  
   
 0.435
CKAN_02400400
Protein kinase domain-containing protein.
  
   
 0.414
CKAN_00538200
HEAT repeat-containing protein 5B.
  
  
 0.411
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.