Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00492400 | CKAN_00805300 | A0A3S3M3K2 | A0A3S3Q506 | Glycoside hydrolase; Belongs to the glycosyl hydrolase 28 family. | Protein TIFY 10A. | 0.707 |
CKAN_00492400 | CKAN_00816900 | A0A3S3M3K2 | A0A3S3MNH9 | Glycoside hydrolase; Belongs to the glycosyl hydrolase 28 family. | Protein TIFY 6B-like protein. | 0.707 |
CKAN_00492400 | CKAN_02514900 | A0A3S3M3K2 | A0A3S3NWG7 | Glycoside hydrolase; Belongs to the glycosyl hydrolase 28 family. | Protein TIFY 3B. | 0.707 |
CKAN_00492400 | CKAN_02522300 | A0A3S3M3K2 | A0A3S4PWW5 | Glycoside hydrolase; Belongs to the glycosyl hydrolase 28 family. | Protein TIFY 10A-like protein. | 0.707 |
CKAN_00805300 | CKAN_00492400 | A0A3S3Q506 | A0A3S3M3K2 | Protein TIFY 10A. | Glycoside hydrolase; Belongs to the glycosyl hydrolase 28 family. | 0.707 |
CKAN_00805300 | CKAN_00816900 | A0A3S3Q506 | A0A3S3MNH9 | Protein TIFY 10A. | Protein TIFY 6B-like protein. | 0.806 |
CKAN_00805300 | CKAN_01571900 | A0A3S3Q506 | A0A3S3MND6 | Protein TIFY 10A. | Transcription factor MYC2. | 0.945 |
CKAN_00805300 | CKAN_01588400 | A0A3S3Q506 | A0A3S3NUT0 | Protein TIFY 10A. | Protein TIFY 9. | 0.922 |
CKAN_00805300 | CKAN_01626400 | A0A3S3Q506 | A0A443P995 | Protein TIFY 10A. | Transcription factor MYC. | 0.945 |
CKAN_00805300 | CKAN_01794000 | A0A3S3Q506 | A0A443PDS3 | Protein TIFY 10A. | Transcription factor MYC2-like protein. | 0.898 |
CKAN_00805300 | CKAN_02131500 | A0A3S3Q506 | A0A3S3N4F8 | Protein TIFY 10A. | Auxin F-box protein 5. | 0.986 |
CKAN_00805300 | CKAN_02514900 | A0A3S3Q506 | A0A3S3NWG7 | Protein TIFY 10A. | Protein TIFY 3B. | 0.735 |
CKAN_00805300 | CKAN_02627700 | A0A3S3Q506 | A0A443Q1G7 | Protein TIFY 10A. | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | 0.837 |
CKAN_00816900 | CKAN_00492400 | A0A3S3MNH9 | A0A3S3M3K2 | Protein TIFY 6B-like protein. | Glycoside hydrolase; Belongs to the glycosyl hydrolase 28 family. | 0.707 |
CKAN_00816900 | CKAN_00805300 | A0A3S3MNH9 | A0A3S3Q506 | Protein TIFY 6B-like protein. | Protein TIFY 10A. | 0.806 |
CKAN_00816900 | CKAN_01571900 | A0A3S3MNH9 | A0A3S3MND6 | Protein TIFY 6B-like protein. | Transcription factor MYC2. | 0.948 |
CKAN_00816900 | CKAN_01588400 | A0A3S3MNH9 | A0A3S3NUT0 | Protein TIFY 6B-like protein. | Protein TIFY 9. | 0.874 |
CKAN_00816900 | CKAN_01626400 | A0A3S3MNH9 | A0A443P995 | Protein TIFY 6B-like protein. | Transcription factor MYC. | 0.948 |
CKAN_00816900 | CKAN_01794000 | A0A3S3MNH9 | A0A443PDS3 | Protein TIFY 6B-like protein. | Transcription factor MYC2-like protein. | 0.846 |
CKAN_00816900 | CKAN_02131500 | A0A3S3MNH9 | A0A3S3N4F8 | Protein TIFY 6B-like protein. | Auxin F-box protein 5. | 0.876 |
page 1 of 5