Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00123000 | CKAN_00347000 | A0A443N3A6 | A0A443N9A8 | Chorismate mutase. | Anthranilate synthase beta subunit 2, chloroplastic-like protein isoform X1. | 0.940 |
CKAN_00123000 | CKAN_00584000 | A0A443N3A6 | A0A3S3MCQ2 | Chorismate mutase. | Aspartate aminotransferase. | 0.823 |
CKAN_00123000 | CKAN_00751100 | A0A443N3A6 | A0A3S4NLZ7 | Chorismate mutase. | Arogenate dehydrogenase 1, chloroplastic isoform X1. | 0.893 |
CKAN_00123000 | CKAN_00809200 | A0A443N3A6 | A0A3S4NNG3 | Chorismate mutase. | Phenylalanine ammonia-lyase. | 0.801 |
CKAN_00123000 | CKAN_01218200 | A0A443N3A6 | A0A3S3MNW5 | Chorismate mutase. | Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine. | 0.924 |
CKAN_00123000 | CKAN_01274900 | A0A443N3A6 | A0A3S3MPV4 | Chorismate mutase. | Phenylalanine ammonia-lyase. | 0.802 |
CKAN_00123000 | CKAN_01384100 | A0A443N3A6 | A0A3S3MYR1 | Chorismate mutase. | Protein PHYLLO, chloroplastic isoform X1. | 0.952 |
CKAN_00123000 | CKAN_02029800 | A0A443N3A6 | A0A443PK52 | Chorismate mutase. | Chorismate mutase. | 0.885 |
CKAN_00123000 | CKAN_02495100 | A0A443N3A6 | A0A3S3R5B7 | Chorismate mutase. | Histidinol-phosphate aminotransferase, chloroplastic isoform X1. | 0.946 |
CKAN_00123000 | CKAN_02604300 | A0A443N3A6 | A0A443Q0W9 | Chorismate mutase. | Phenylalanine ammonia-lyase. | 0.802 |
CKAN_00347000 | CKAN_00123000 | A0A443N9A8 | A0A443N3A6 | Anthranilate synthase beta subunit 2, chloroplastic-like protein isoform X1. | Chorismate mutase. | 0.940 |
CKAN_00347000 | CKAN_00751100 | A0A443N9A8 | A0A3S4NLZ7 | Anthranilate synthase beta subunit 2, chloroplastic-like protein isoform X1. | Arogenate dehydrogenase 1, chloroplastic isoform X1. | 0.896 |
CKAN_00347000 | CKAN_01218200 | A0A443N9A8 | A0A3S3MNW5 | Anthranilate synthase beta subunit 2, chloroplastic-like protein isoform X1. | Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine. | 0.876 |
CKAN_00347000 | CKAN_01384100 | A0A443N9A8 | A0A3S3MYR1 | Anthranilate synthase beta subunit 2, chloroplastic-like protein isoform X1. | Protein PHYLLO, chloroplastic isoform X1. | 0.998 |
CKAN_00347000 | CKAN_02029800 | A0A443N9A8 | A0A443PK52 | Anthranilate synthase beta subunit 2, chloroplastic-like protein isoform X1. | Chorismate mutase. | 0.940 |
CKAN_00347000 | CKAN_02495100 | A0A443N9A8 | A0A3S3R5B7 | Anthranilate synthase beta subunit 2, chloroplastic-like protein isoform X1. | Histidinol-phosphate aminotransferase, chloroplastic isoform X1. | 0.648 |
CKAN_00584000 | CKAN_00123000 | A0A3S3MCQ2 | A0A443N3A6 | Aspartate aminotransferase. | Chorismate mutase. | 0.823 |
CKAN_00584000 | CKAN_00751100 | A0A3S3MCQ2 | A0A3S4NLZ7 | Aspartate aminotransferase. | Arogenate dehydrogenase 1, chloroplastic isoform X1. | 0.911 |
CKAN_00584000 | CKAN_00809200 | A0A3S3MCQ2 | A0A3S4NNG3 | Aspartate aminotransferase. | Phenylalanine ammonia-lyase. | 0.880 |
CKAN_00584000 | CKAN_01218200 | A0A3S3MCQ2 | A0A3S3MNW5 | Aspartate aminotransferase. | Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine. | 0.906 |
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