STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01231100RNA polymerase beta subunit chloroplast. (151 aa)    
Predicted Functional Partners:
CKAN_01175400
DNA-directed RNA polymerases II, IV and V subunit 6A isoform X1.
  
 0.979
CKAN_00059200
DNA-directed RNA polymerases II, IV and V subunit 3-like protein.
  
 0.978
CKAN_02769100
DNA-directed RNA polymerases II, IV and V subunit 3-like protein.
  
 0.978
CKAN_00461800
DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1.
  
 0.975
CKAN_02487900
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.975
CKAN_00498100
Uncharacterized protein.
  
 0.973
CKAN_00440900
DNA-directed RNA polymerase I subunit 1.
  
 0.973
CKAN_00478100
Ribosomal protein S10.
  
 
 0.957
CKAN_00205900
DNA-directed RNA polymerases II, IV and V subunit 11.
   
 0.948
CKAN_01209700
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.948
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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