STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00191800Mitochondrial substrate/solute carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family. (298 aa)    
Predicted Functional Partners:
CKAN_02627700
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
  
 0.468
CKAN_02437500
Cytochrome c oxidase assembly protein COX15.
   
 
 0.428
CKAN_02452000
Mitochondrial carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.415
CKAN_01067900
Ribosomal protein L7/L12.
   
 0.407
CKAN_01306700
SecY/SEC61-alpha family; Belongs to the SecY/SEC61-alpha family.
    
   0.407
CKAN_02064900
Protein transport protein Sec61 subunit alpha-like protein; Belongs to the SecY/SEC61-alpha family.
    
   0.407
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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