Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00104600 | CKAN_00152800 | A0A3S3MQ61 | A0A3S3MR11 | RNA polymerase II subunit 5-mediating protein isoform X2. | DNA-directed RNA polymerases I and III subunit RPAC2. | 0.774 |
CKAN_00104600 | CKAN_00167900 | A0A3S3MQ61 | A0A443N4G3 | RNA polymerase II subunit 5-mediating protein isoform X2. | RuvB-like helicase; Belongs to the RuvB family. | 0.888 |
CKAN_00104600 | CKAN_00316700 | A0A3S3MQ61 | A0A3S3PXL6 | RNA polymerase II subunit 5-mediating protein isoform X2. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.739 |
CKAN_00104600 | CKAN_00443500 | A0A3S3MQ61 | A0A3S3M2R3 | RNA polymerase II subunit 5-mediating protein isoform X2. | DNA-directed RNA polymerases II and IV subunit 5A. | 0.860 |
CKAN_00104600 | CKAN_00488900 | A0A3S3MQ61 | A0A443ND53 | RNA polymerase II subunit 5-mediating protein isoform X2. | RNA polymerase II-associated protein 3 isoform X2. | 0.859 |
CKAN_00104600 | CKAN_00995900 | A0A3S3MQ61 | A0A3S3MRW2 | RNA polymerase II subunit 5-mediating protein isoform X2. | Protein UXT isoform X4. | 0.924 |
CKAN_00104600 | CKAN_01124300 | A0A3S3MQ61 | A0A3S3NM77 | RNA polymerase II subunit 5-mediating protein isoform X2. | DNA-directed RNA polymerases IV and V subunit 5B-like protein. | 0.860 |
CKAN_00104600 | CKAN_02451500 | A0A3S3MQ61 | A0A443PWM8 | RNA polymerase II subunit 5-mediating protein isoform X2. | Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2. | 0.601 |
CKAN_00104600 | CKAN_02555600 | A0A3S3MQ61 | A0A443PZH8 | RNA polymerase II subunit 5-mediating protein isoform X2. | Prefoldin subunit 6 isoform X1. | 0.891 |
CKAN_00104600 | CKAN_02649100 | A0A3S3MQ61 | A0A443Q229 | RNA polymerase II subunit 5-mediating protein isoform X2. | DNA-directed RNA polymerases II and IV subunit 5A. | 0.860 |
CKAN_00152800 | CKAN_00104600 | A0A3S3MR11 | A0A3S3MQ61 | DNA-directed RNA polymerases I and III subunit RPAC2. | RNA polymerase II subunit 5-mediating protein isoform X2. | 0.774 |
CKAN_00152800 | CKAN_00316700 | A0A3S3MR11 | A0A3S3PXL6 | DNA-directed RNA polymerases I and III subunit RPAC2. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
CKAN_00152800 | CKAN_00443500 | A0A3S3MR11 | A0A3S3M2R3 | DNA-directed RNA polymerases I and III subunit RPAC2. | DNA-directed RNA polymerases II and IV subunit 5A. | 0.997 |
CKAN_00152800 | CKAN_00488900 | A0A3S3MR11 | A0A443ND53 | DNA-directed RNA polymerases I and III subunit RPAC2. | RNA polymerase II-associated protein 3 isoform X2. | 0.711 |
CKAN_00152800 | CKAN_00995900 | A0A3S3MR11 | A0A3S3MRW2 | DNA-directed RNA polymerases I and III subunit RPAC2. | Protein UXT isoform X4. | 0.774 |
CKAN_00152800 | CKAN_01124300 | A0A3S3MR11 | A0A3S3NM77 | DNA-directed RNA polymerases I and III subunit RPAC2. | DNA-directed RNA polymerases IV and V subunit 5B-like protein. | 0.997 |
CKAN_00152800 | CKAN_02649100 | A0A3S3MR11 | A0A443Q229 | DNA-directed RNA polymerases I and III subunit RPAC2. | DNA-directed RNA polymerases II and IV subunit 5A. | 0.997 |
CKAN_00167900 | CKAN_00104600 | A0A443N4G3 | A0A3S3MQ61 | RuvB-like helicase; Belongs to the RuvB family. | RNA polymerase II subunit 5-mediating protein isoform X2. | 0.888 |
CKAN_00167900 | CKAN_00443500 | A0A443N4G3 | A0A3S3M2R3 | RuvB-like helicase; Belongs to the RuvB family. | DNA-directed RNA polymerases II and IV subunit 5A. | 0.758 |
CKAN_00167900 | CKAN_00488900 | A0A443N4G3 | A0A443ND53 | RuvB-like helicase; Belongs to the RuvB family. | RNA polymerase II-associated protein 3 isoform X2. | 0.958 |
page 1 of 5