Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00287700 | CKAN_00768100 | A0A3S3MIT6 | A0A443NKV7 | Putative signal peptidase complex subunit 1. | Hexosyltransferase; Belongs to the glycosyltransferase 8 family. | 0.965 |
CKAN_00287700 | CKAN_01041000 | A0A3S3MIT6 | A0A3S3MSP4 | Putative signal peptidase complex subunit 1. | Signal peptidase I. | 0.974 |
CKAN_00287700 | CKAN_02298900 | A0A3S3MIT6 | A0A3S3NK48 | Putative signal peptidase complex subunit 1. | Signal peptidase complex subunit 3; Microsomal signal peptidase is a membrane-bound endoproteinase that removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum. Belongs to the SPCS3 family. | 0.977 |
CKAN_00287700 | CKAN_02470900 | A0A3S3MIT6 | A0A3S3N3R4 | Putative signal peptidase complex subunit 1. | Signal peptidase complex subunit 3; Microsomal signal peptidase is a membrane-bound endoproteinase that removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum. Belongs to the SPCS3 family. | 0.977 |
CKAN_00287700 | CYN | A0A3S3MIT6 | A0A443Q0M4 | Putative signal peptidase complex subunit 1. | Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. | 0.989 |
CKAN_00725900 | CKAN_01041000 | A0A3S3M7X3 | A0A3S3MSP4 | Protein KTI12. | Signal peptidase I. | 0.912 |
CKAN_00725900 | CKAN_01254700 | A0A3S3M7X3 | A0A3S3N1P9 | Protein KTI12. | AUGMIN subunit 6-like protein. | 0.891 |
CKAN_00725900 | CKAN_02632800 | A0A3S3M7X3 | A0A443Q1M5 | Protein KTI12. | AUGMIN subunit 6-like protein. | 0.891 |
CKAN_00768100 | CKAN_00287700 | A0A443NKV7 | A0A3S3MIT6 | Hexosyltransferase; Belongs to the glycosyltransferase 8 family. | Putative signal peptidase complex subunit 1. | 0.965 |
CKAN_00768100 | CKAN_01041000 | A0A443NKV7 | A0A3S3MSP4 | Hexosyltransferase; Belongs to the glycosyltransferase 8 family. | Signal peptidase I. | 0.958 |
CKAN_00768100 | CKAN_02424100 | A0A443NKV7 | A0A3S3N9C8 | Hexosyltransferase; Belongs to the glycosyltransferase 8 family. | Putative signal peptidase complex subunit 1. | 0.965 |
CKAN_00768100 | CYN | A0A443NKV7 | A0A443Q0M4 | Hexosyltransferase; Belongs to the glycosyltransferase 8 family. | Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. | 0.985 |
CKAN_01041000 | CKAN_00287700 | A0A3S3MSP4 | A0A3S3MIT6 | Signal peptidase I. | Putative signal peptidase complex subunit 1. | 0.974 |
CKAN_01041000 | CKAN_00725900 | A0A3S3MSP4 | A0A3S3M7X3 | Signal peptidase I. | Protein KTI12. | 0.912 |
CKAN_01041000 | CKAN_00768100 | A0A3S3MSP4 | A0A443NKV7 | Signal peptidase I. | Hexosyltransferase; Belongs to the glycosyltransferase 8 family. | 0.958 |
CKAN_01041000 | CKAN_01254700 | A0A3S3MSP4 | A0A3S3N1P9 | Signal peptidase I. | AUGMIN subunit 6-like protein. | 0.819 |
CKAN_01041000 | CKAN_02298900 | A0A3S3MSP4 | A0A3S3NK48 | Signal peptidase I. | Signal peptidase complex subunit 3; Microsomal signal peptidase is a membrane-bound endoproteinase that removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum. Belongs to the SPCS3 family. | 0.958 |
CKAN_01041000 | CKAN_02319000 | A0A3S3MSP4 | A0A3S3N1A0 | Signal peptidase I. | DNA ligase. | 0.726 |
CKAN_01041000 | CKAN_02424100 | A0A3S3MSP4 | A0A3S3N9C8 | Signal peptidase I. | Putative signal peptidase complex subunit 1. | 0.974 |
CKAN_01041000 | CKAN_02470900 | A0A3S3MSP4 | A0A3S3N3R4 | Signal peptidase I. | Signal peptidase complex subunit 3; Microsomal signal peptidase is a membrane-bound endoproteinase that removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum. Belongs to the SPCS3 family. | 0.958 |
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