STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00816000Dual specificity phosphatase. (139 aa)    
Predicted Functional Partners:
CKAN_00541500
SANT/Myb domain-containing protein.
    
 0.876
CKAN_00406300
Phox domain-containing protein.
    
 0.876
CKAN_00217000
mRNA cap guanine-N7 methyltransferase.
   
 0.837
CKAN_01540200
Nuclear cap-binding protein subunit 2.
   
 
 0.813
CKAN_01958700
DNA-directed RNA polymerase II subunit 4.
    
 0.792
CKAN_00059200
DNA-directed RNA polymerases II, IV and V subunit 3-like protein.
   
 0.790
CKAN_02769100
DNA-directed RNA polymerases II, IV and V subunit 3-like protein.
   
 0.790
CKAN_00497800
Nuclear cap-binding protein subunit 1.
   
 
 0.772
CKAN_00530300
Transcription elongation factor SPT5.
    
 0.771
CKAN_02248400
Uncharacterized protein.
    
 0.771
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.