STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00354100Peroxisome biogenesis factor 10. (369 aa)    
Predicted Functional Partners:
CKAN_02592500
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 0.999
CKAN_02441400
Peroxisome biogenesis protein 5.
    
 0.976
CKAN_02749600
Peroxisome biogenesis protein 1 isoform X1.
   
 0.959
CKAN_01445600
Peroxisomal membrane protein PEX14 isoform X1.
    
 0.955
CKAN_01071400
Peroxisomal membrane protein PEX14-like protein isoform X3.
    
 0.955
CKAN_00930100
Peroxisome biogenesis protein 19-1-like protein isoform X2.
    
 
 0.953
CKAN_01462100
Peroxisome biogenesis protein 6 isoform X1.
   
 0.893
CKAN_01828300
WD40 repeat.
     
 0.885
CKAN_00354200
Stress responsive alpha-beta barrel.
     
 0.880
CKAN_01805800
3-ketoacyl-CoA thiolase 2, peroxisomal; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.825
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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