STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01924200Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (405 aa)    
Predicted Functional Partners:
CKAN_01479600
1-acylglycerol-3-phosphate O-acyltransferase.
    
 0.969
CKAN_01479700
1-acylglycerol-3-phosphate O-acyltransferase.
    
 0.969
CKAN_00643700
Proline iminopeptidase.
    
 0.969
CKAN_02665600
Long chain aycl-CoA synthetase 9.
   
 
 0.908
CKAN_01914400
Phosphatidate phosphatase PAH2-like protein.
     
 0.886
CKAN_02175900
Phosphatidate phosphatase PAH2-like protein.
     
 0.886
CKAN_00532000
Phosphatidate phosphatase PAH1-like protein isoform X1.
     
 0.886
CKAN_00684100
Diacylglycerol O-acyltransferase 2D-like protein.
     
 0.867
CKAN_00099600
Diacylglycerol O-acyltransferase 2.
     
 0.867
CKAN_00099500
Diacylglycerol O-acyltransferase 2D-like protein.
     
 0.867
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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