STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00506000Enhancer of rudimentary homolog; May have a role in the cell cycle. (103 aa)    
Predicted Functional Partners:
CKAN_02342800
Putative small nuclear ribonucleoprotein F.
   
   0.757
CKAN_01337700
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
   
   0.748
CKAN_01570600
Protein mago nashi.
   
   0.529
CKAN_01033000
THO complex subunit 4A.
   
 
 0.481
CKAN_01492500
THO complex subunit 4A-like protein isoform X2.
   
 
 0.481
CKAN_02534800
THO complex subunit 4D-like protein.
   
 
 0.481
CKAN_02177100
Eukaryotic initiation factor 4A-I isoform X2.
   
 
 0.472
CKAN_02117800
Eukaryotic initiation factor 4A-3.
   
 
 0.472
CKAN_01296500
Putative small nuclear ribonucleoprotein G.
   
    0.446
CKAN_01750300
Small nuclear ribonucleoprotein G.
   
    0.446
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.