STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01737000Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. (331 aa)    
Predicted Functional Partners:
CKAN_01769600
Tetrahydrocannabinolic acid synthase-like protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
     
 0.876
CKAN_00656000
Putative cinnamyl alcohol dehydrogenase 1.
     
 0.816
CKAN_01171800
Putative cinnamyl alcohol dehydrogenase 1.
     
 0.816
CKAN_01669000
FAD linked oxidase; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
     
 0.689
CKAN_01669800
Reticuline oxidase.
     
 0.689
CKAN_01669700
FAD linked oxidase.
     
 0.689
CKAN_01669400
FAD linked oxidase.
     
 0.689
CKAN_01669300
FAD linked oxidase.
     
 0.689
CKAN_02156400
Putative cinnamyl alcohol dehydrogenase 6.
     
 0.666
CKAN_00240300
Putative mannitol dehydrogenase.
     
 0.666
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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