STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01049900Cullin-4-like protein isoform X1; Belongs to the cullin family. (836 aa)    
Predicted Functional Partners:
CKAN_01779500
DNA damage-binding protein 1.
  
 0.999
CKAN_02335400
Denticleless protein isoform X3.
    
 0.998
CKAN_02396600
DDB1-and CUL4-associated factor 1.
   
 0.995
CKAN_01937000
Cullin-associated NEDD8-dissociated protein 1 isoform X1.
   
 0.988
CKAN_02658200
DNA excision repair protein ERCC-8 isoform X1.
    
 0.987
CKAN_01852800
DET1-and DDB1-associated protein 1-like protein.
    
 0.982
CKAN_00806400
RING-box protein 1a.
    
 0.981
CKAN_02523800
RING-box protein 1a-like protein.
    
 0.981
CKAN_02504900
COP9 signalosome complex subunit 4.
    
 0.979
CKAN_00832100
COP9 signalosome complex subunit 2.
   
 0.974
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.