STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01364100Enolpyruvate transferase domain-containing protein. (200 aa)    
Predicted Functional Partners:
CKAN_01213100
Chorismate synthase.
  
 
 0.894
CKAN_01213200
Chorismate synthase.
  
 
 0.894
CKAN_00123000
Chorismate mutase.
  
 
 0.869
CKAN_00208900
Shikimate kinase 3, chloroplastic.
  
 
 0.861
CKAN_02231000
Shikimate kinase 3, chloroplastic.
  
 
 0.861
CKAN_01115700
Putative bifunctional dihydrofolate reductase-thymidylate synthase isoform X1.
  
 
 0.855
CKAN_01765600
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.853
CKAN_02495100
Histidinol-phosphate aminotransferase, chloroplastic isoform X1.
  
 
 0.845
CKAN_00347000
Anthranilate synthase beta subunit 2, chloroplastic-like protein isoform X1.
  
 0.843
CKAN_02029800
Chorismate mutase.
  
 
 0.842
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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