STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02188900Stromal heat shock-related protein, chloroplastic; Belongs to the heat shock protein 70 family. (707 aa)    
Predicted Functional Partners:
CKAN_02603600
Mitochondrial import inner membrane translocase subunit TIM44-2.
   
 0.924
CKAN_01047900
Heat shock protein 17.
  
0.877
CKAN_00827400
Protein GrpE; Belongs to the GrpE family.
  
 0.870
CKAN_00323000
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 0.870
CKAN_02665400
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 0.870
CKAN_02572800
TPR repeat-containing thioredoxin TTL1-like protein.
  
 0.865
CKAN_02690000
TPR repeat-containing thioredoxin TTL1-like protein.
  
 0.865
CKAN_01829600
TPR repeat-containing thioredoxin TTL1-like protein.
  
 0.865
CKAN_01845700
Ankyrin-1 isoform X1.
  
 0.852
CKAN_01430700
Sucrose-phosphatase 2.
  
 0.849
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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