STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01848300Protein STAY-GREEN, chloroplastic-like protein. (249 aa)    
Predicted Functional Partners:
CKAN_02544100
7-hydroxymethyl chlorophyll a reductase, chloroplastic isoform X1.
    
 0.852
CKAN_02669000
NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily.
    
 0.822
CKAN_02200900
Protein STAY-GREEN LIKE, chloroplastic isoform X1.
  
  
 
0.820
CKAN_00053600
Chlorophyllide a oxygenase, chloroplastic.
   
 0.818
CKAN_00053800
Chlorophyllide a oxygenase, chloroplastic-like protein isoform X1.
   
 0.818
CKAN_00501600
Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic.
     
 0.818
CKAN_01798100
Chlorophyllase-1.
     
 0.814
CKAN_02045700
Protein TIC 55, chloroplastic.
   
 0.746
CKAN_01000600
Chlorophyll synthase, chloroplastic.
     
 0.744
CKAN_00741100
Chlorophyll synthase, chloroplastic.
     
 0.744
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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