Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00331500 | CKAN_00771400 | A0A3S3N8Z1 | A0A443NKS3 | Alpha-D-phosphohexomutase superfamily. | Threonine dehydratase. | 0.694 |
CKAN_00331500 | CKAN_01146200 | A0A3S3N8Z1 | A0A3S3MZZ6 | Alpha-D-phosphohexomutase superfamily. | Protein EFFECTOR OF TRANSCRIPTION 2. | 0.780 |
CKAN_00331500 | CKAN_01621500 | A0A3S3N8Z1 | A0A3S3N2Y3 | Alpha-D-phosphohexomutase superfamily. | Phosphoacetylglucosamine mutase; Interconverts GlcNAc-6-P and GlcNAc-1-P. Belongs to the phosphohexose mutase family. | 0.465 |
CKAN_00664400 | CKAN_01146200 | A0A3S3Q2L6 | A0A3S3MZZ6 | annotation not available | Protein EFFECTOR OF TRANSCRIPTION 2. | 0.776 |
CKAN_00664400 | CKAN_01317300 | A0A3S3Q2L6 | A0A3S3QH91 | annotation not available | Bacterial transferase hexapeptide repeat. | 0.997 |
CKAN_00664400 | CKAN_02413500 | A0A3S3Q2L6 | A0A3S3R5K3 | annotation not available | Cysteine synthase 2 isoform X1. | 0.707 |
CKAN_00771400 | CKAN_00331500 | A0A443NKS3 | A0A3S3N8Z1 | Threonine dehydratase. | Alpha-D-phosphohexomutase superfamily. | 0.694 |
CKAN_00771400 | CKAN_00962500 | A0A443NKS3 | A0A443NR15 | Threonine dehydratase. | Tryptophan synthase alpha chain-like protein; Belongs to the TrpA family. | 0.947 |
CKAN_00771400 | CKAN_01146200 | A0A443NKS3 | A0A3S3MZZ6 | Threonine dehydratase. | Protein EFFECTOR OF TRANSCRIPTION 2. | 0.863 |
CKAN_00771400 | CKAN_01196500 | A0A443NKS3 | A0A3S3P559 | Threonine dehydratase. | Phosphoserine phosphatase, chloroplastic. | 0.934 |
CKAN_00771400 | CKAN_01273600 | A0A443NKS3 | A0A443NZJ0 | Threonine dehydratase. | Alpha-D-phosphohexomutase superfamily. | 0.694 |
CKAN_00771400 | CKAN_02101200 | A0A443NKS3 | A0A3S3NBG8 | Threonine dehydratase. | Serine racemase. | 0.923 |
CKAN_00771400 | CKAN_02413500 | A0A443NKS3 | A0A3S3R5K3 | Threonine dehydratase. | Cysteine synthase 2 isoform X1. | 0.774 |
CKAN_00962500 | CKAN_00771400 | A0A443NR15 | A0A443NKS3 | Tryptophan synthase alpha chain-like protein; Belongs to the TrpA family. | Threonine dehydratase. | 0.947 |
CKAN_00962500 | CKAN_01146200 | A0A443NR15 | A0A3S3MZZ6 | Tryptophan synthase alpha chain-like protein; Belongs to the TrpA family. | Protein EFFECTOR OF TRANSCRIPTION 2. | 0.828 |
CKAN_00962500 | CKAN_01196500 | A0A443NR15 | A0A3S3P559 | Tryptophan synthase alpha chain-like protein; Belongs to the TrpA family. | Phosphoserine phosphatase, chloroplastic. | 0.906 |
CKAN_00962500 | CKAN_02101200 | A0A443NR15 | A0A3S3NBG8 | Tryptophan synthase alpha chain-like protein; Belongs to the TrpA family. | Serine racemase. | 0.943 |
CKAN_00962500 | CKAN_02413500 | A0A443NR15 | A0A3S3R5K3 | Tryptophan synthase alpha chain-like protein; Belongs to the TrpA family. | Cysteine synthase 2 isoform X1. | 0.807 |
CKAN_01146200 | CKAN_00331500 | A0A3S3MZZ6 | A0A3S3N8Z1 | Protein EFFECTOR OF TRANSCRIPTION 2. | Alpha-D-phosphohexomutase superfamily. | 0.780 |
CKAN_01146200 | CKAN_00664400 | A0A3S3MZZ6 | A0A3S3Q2L6 | Protein EFFECTOR OF TRANSCRIPTION 2. | annotation not available | 0.776 |
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