Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00073600 | CKAN_00080900 | A0A3S3LVR9 | A0A3S3NPB3 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | WD-40 repeat-containing protein MSI4-like protein; Belongs to the disease resistance NB-LRR family. | 0.954 |
CKAN_00073600 | CKAN_00193400 | A0A3S3LVR9 | A0A3S3M5K9 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | WD-40 repeat-containing protein MSI4-like protein. | 0.954 |
CKAN_00073600 | CKAN_00193800 | A0A3S3LVR9 | A0A443N541 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | WD-40 repeat-containing protein MSI4-like protein. | 0.954 |
CKAN_00073600 | CKAN_00726200 | A0A3S3LVR9 | A0A3S3N0V4 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Histone deacetylation protein Rxt3. | 0.731 |
CKAN_00073600 | CKAN_01317400 | A0A3S3LVR9 | A0A3S4P195 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | PAH domain-containing protein/Sin3_corepress domain-containing protein. | 0.985 |
CKAN_00073600 | CKAN_01776900 | A0A3S3LVR9 | A0A443PD89 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | WD40 repeat. | 0.954 |
CKAN_00073600 | CKAN_02015000 | A0A3S3LVR9 | A0A443PJT9 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Paired amphipathic helix protein Sin3-like protein 4 isoform X1. | 0.985 |
CKAN_00080900 | CKAN_00073600 | A0A3S3NPB3 | A0A3S3LVR9 | WD-40 repeat-containing protein MSI4-like protein; Belongs to the disease resistance NB-LRR family. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.954 |
CKAN_00080900 | CKAN_00726200 | A0A3S3NPB3 | A0A3S3N0V4 | WD-40 repeat-containing protein MSI4-like protein; Belongs to the disease resistance NB-LRR family. | Histone deacetylation protein Rxt3. | 0.518 |
CKAN_00080900 | CKAN_01123100 | A0A3S3NPB3 | A0A3S4NWF5 | WD-40 repeat-containing protein MSI4-like protein; Belongs to the disease resistance NB-LRR family. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.954 |
CKAN_00080900 | CKAN_01317400 | A0A3S3NPB3 | A0A3S4P195 | WD-40 repeat-containing protein MSI4-like protein; Belongs to the disease resistance NB-LRR family. | PAH domain-containing protein/Sin3_corepress domain-containing protein. | 0.920 |
CKAN_00080900 | CKAN_02015000 | A0A3S3NPB3 | A0A443PJT9 | WD-40 repeat-containing protein MSI4-like protein; Belongs to the disease resistance NB-LRR family. | Paired amphipathic helix protein Sin3-like protein 4 isoform X1. | 0.920 |
CKAN_00193400 | CKAN_00073600 | A0A3S3M5K9 | A0A3S3LVR9 | WD-40 repeat-containing protein MSI4-like protein. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.954 |
CKAN_00193400 | CKAN_00726200 | A0A3S3M5K9 | A0A3S3N0V4 | WD-40 repeat-containing protein MSI4-like protein. | Histone deacetylation protein Rxt3. | 0.518 |
CKAN_00193400 | CKAN_01123100 | A0A3S3M5K9 | A0A3S4NWF5 | WD-40 repeat-containing protein MSI4-like protein. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.954 |
CKAN_00193400 | CKAN_01317400 | A0A3S3M5K9 | A0A3S4P195 | WD-40 repeat-containing protein MSI4-like protein. | PAH domain-containing protein/Sin3_corepress domain-containing protein. | 0.920 |
CKAN_00193400 | CKAN_02015000 | A0A3S3M5K9 | A0A443PJT9 | WD-40 repeat-containing protein MSI4-like protein. | Paired amphipathic helix protein Sin3-like protein 4 isoform X1. | 0.920 |
CKAN_00193800 | CKAN_00073600 | A0A443N541 | A0A3S3LVR9 | WD-40 repeat-containing protein MSI4-like protein. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.954 |
CKAN_00193800 | CKAN_00726200 | A0A443N541 | A0A3S3N0V4 | WD-40 repeat-containing protein MSI4-like protein. | Histone deacetylation protein Rxt3. | 0.518 |
CKAN_00193800 | CKAN_01123100 | A0A443N541 | A0A3S4NWF5 | WD-40 repeat-containing protein MSI4-like protein. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.954 |
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