STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01224600Glutathione S-transferase. (337 aa)    
Predicted Functional Partners:
CKAN_02202300
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.944
CKAN_01929200
Putative methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.944
CKAN_00725300
Elongation factor 1-gamma 2.
   
 0.859
CKAN_02293400
Glutathione synthetase.
    
 0.842
CKAN_00201600
Uncharacterized protein.
   
 0.830
CKAN_00308100
Elongation factor 1-beta-like protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.830
CKAN_00842800
Elongation factor 1-beta 2; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.830
CKAN_01165800
Elongation factor 1-delta 1; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.830
CKAN_02421800
Elongation factor 1-delta-like protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.830
CKAN_01630100
Glutathione reductase; Maintains high levels of reduced glutathione.
   
 0.829
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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