STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02348700Endoglucanase. (502 aa)    
Predicted Functional Partners:
CKAN_01507800
Glycoside hydrolase; Belongs to the glycosyl hydrolase 3 family.
    
  0.881
CKAN_01694900
Putative beta-glucosidase 41 isoform X1; Belongs to the glycosyl hydrolase 1 family.
     
 0.873
CKAN_00115500
Beta-glucosidase 6 isoform X2; Belongs to the glycosyl hydrolase 1 family.
     
 0.843
CKAN_02259900
Beta-glucosidase 6-like protein; Belongs to the glycosyl hydrolase 1 family.
     
 0.843
CKAN_00420900
Chromatin structure-remodeling complex protein SYD-like protein isoform X1.
   
 0.780
CKAN_02533900
Chromatin structure-remodeling complex protein SYD isoform X1.
   
 0.780
CKAN_01981300
COP1-interacting protein 7, putative isoform 1.
     
 0.738
CKAN_02421400
Glycoside hydrolase; Belongs to the glycosyl hydrolase 1 family.
     
 0.738
CKAN_02600400
Beta-glucosidase 18-like protein; Belongs to the glycosyl hydrolase 1 family.
     
 0.738
CKAN_01330000
Beta-glucosidase 18; Belongs to the glycosyl hydrolase 1 family.
     
 0.738
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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