STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00773500DnaJ domain-containing protein. (236 aa)    
Predicted Functional Partners:
CKAN_02572300
Bifunctional riboflavin kinase/FMN phosphatase-like protein.
   
 0.892
CKAN_01047900
Heat shock protein 17.
  
 0.798
CKAN_00706300
Uncharacterized protein.
    
 0.717
PURA
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
  
 
 0.714
CKAN_00450700
39S ribosomal protein L46, mitochondrial.
   
 
 0.703
CKAN_01534900
Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.703
CKAN_01809600
39S ribosomal protein L47, mitochondrial-like protein.
    
   0.694
CKAN_01455400
Urease accessory protein UreD.
   
  0.688
CKAN_02325400
Bifunctional purine biosynthesis protein PurH-like protein isoform X2.
   
  0.688
CKAN_01777500
AMP-dependent synthetase/ligase.
    
   0.659
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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