STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01267000Chromatin assembly factor 1 subunit A. (846 aa)    
Predicted Functional Partners:
CKAN_01927500
Chromatin assembly factor 1 subunit FAS2 isoform X4.
   
 
 0.942
CKAN_01776900
WD40 repeat.
   
 
 0.856
CKAN_01436800
DNA polymerase.
   
 
 0.831
CKAN_02768300
Uncharacterized protein.
   
 
 0.828
CKAN_02333800
Histone chaperone ASF1B-like protein.
   
 
 0.828
CKAN_01040100
Histone chaperone.
   
 
 0.828
CKAN_01525500
DNA helicase; Belongs to the MCM family.
   
  
 0.825
CKAN_00355800
DNA helicase; Belongs to the MCM family.
   
 
 0.808
CKAN_00193400
WD-40 repeat-containing protein MSI4-like protein.
   
 
 0.802
CKAN_00080900
WD-40 repeat-containing protein MSI4-like protein; Belongs to the disease resistance NB-LRR family.
   
 
 0.802
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.