STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01280900Fatty acid hydroxylase; Belongs to the sterol desaturase family. (375 aa)    
Predicted Functional Partners:
CKAN_00086700
Lipid phosphate phosphatase delta.
    
 0.932
CKAN_02286200
Diacylglycerol kinase.
   
 0.870
CKAN_02288200
Alkaline ceramidase 3-like protein.
     
 0.852
CKAN_01140900
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 0.838
CKAN_02591700
Acyl-lipid 9-3-desaturase-like protein.
  
 
 0.835
CKAN_02066200
7-dehydrocholesterol reductase.
   
 0.829
CKAN_01254900
Delta14-sterol reductase.
   
 0.829
CKAN_02029100
Omega-6 fatty acid desaturase, chloroplastic-like protein.
  
 
 0.815
CKAN_02161300
Neutral ceramidase.
     
 0.810
CKAN_00511700
3-dehydrosphinganine reductase TSC10A-like protein isoform X1.
    
 0.799
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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