Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00410900 | CKAN_00524300 | A0A3S3M280 | A0A443NE50 | Polyubiquitin 9. | Ubiquitin-conjugating enzyme E2 7; Belongs to the ubiquitin-conjugating enzyme family. | 0.405 |
CKAN_00410900 | CKAN_00806400 | A0A3S3M280 | A0A3S3N2C3 | Polyubiquitin 9. | RING-box protein 1a. | 0.977 |
CKAN_00410900 | CKAN_01049900 | A0A3S3M280 | A0A3S3MY61 | Polyubiquitin 9. | Cullin-4-like protein isoform X1; Belongs to the cullin family. | 0.404 |
CKAN_00410900 | CKAN_01779500 | A0A3S3M280 | A0A3S4PD06 | Polyubiquitin 9. | DNA damage-binding protein 1. | 0.470 |
CKAN_00410900 | CKAN_02123300 | A0A3S3M280 | A0A3S3N4B1 | Polyubiquitin 9. | Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family. | 0.994 |
CKAN_00411000 | CKAN_00524300 | A0A3S3MVQ6 | A0A443NE50 | Polyubiquitin 9. | Ubiquitin-conjugating enzyme E2 7; Belongs to the ubiquitin-conjugating enzyme family. | 0.405 |
CKAN_00411000 | CKAN_00806400 | A0A3S3MVQ6 | A0A3S3N2C3 | Polyubiquitin 9. | RING-box protein 1a. | 0.977 |
CKAN_00411000 | CKAN_01049900 | A0A3S3MVQ6 | A0A3S3MY61 | Polyubiquitin 9. | Cullin-4-like protein isoform X1; Belongs to the cullin family. | 0.404 |
CKAN_00411000 | CKAN_01779500 | A0A3S3MVQ6 | A0A3S4PD06 | Polyubiquitin 9. | DNA damage-binding protein 1. | 0.470 |
CKAN_00411000 | CKAN_02123300 | A0A3S3MVQ6 | A0A3S3N4B1 | Polyubiquitin 9. | Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family. | 0.994 |
CKAN_00524300 | CKAN_00410900 | A0A443NE50 | A0A3S3M280 | Ubiquitin-conjugating enzyme E2 7; Belongs to the ubiquitin-conjugating enzyme family. | Polyubiquitin 9. | 0.405 |
CKAN_00524300 | CKAN_00411000 | A0A443NE50 | A0A3S3MVQ6 | Ubiquitin-conjugating enzyme E2 7; Belongs to the ubiquitin-conjugating enzyme family. | Polyubiquitin 9. | 0.405 |
CKAN_00524300 | CKAN_00806400 | A0A443NE50 | A0A3S3N2C3 | Ubiquitin-conjugating enzyme E2 7; Belongs to the ubiquitin-conjugating enzyme family. | RING-box protein 1a. | 0.971 |
CKAN_00524300 | CKAN_00937600 | A0A443NE50 | A0A3S4NRR3 | Ubiquitin-conjugating enzyme E2 7; Belongs to the ubiquitin-conjugating enzyme family. | Zinc finger CCCH domain-containing protein 17-like protein. | 0.854 |
CKAN_00524300 | CKAN_00945300 | A0A443NE50 | A0A443NQJ8 | Ubiquitin-conjugating enzyme E2 7; Belongs to the ubiquitin-conjugating enzyme family. | F-box/WD repeat-containing protein pof1. | 0.854 |
CKAN_00524300 | CKAN_01049900 | A0A443NE50 | A0A3S3MY61 | Ubiquitin-conjugating enzyme E2 7; Belongs to the ubiquitin-conjugating enzyme family. | Cullin-4-like protein isoform X1; Belongs to the cullin family. | 0.651 |
CKAN_00524300 | CKAN_01253800 | A0A443NE50 | A0A3S4NZL2 | Ubiquitin-conjugating enzyme E2 7; Belongs to the ubiquitin-conjugating enzyme family. | Zinc finger CCCH domain-containing protein 17 isoform X1. | 0.854 |
CKAN_00524300 | CKAN_01779500 | A0A443NE50 | A0A3S4PD06 | Ubiquitin-conjugating enzyme E2 7; Belongs to the ubiquitin-conjugating enzyme family. | DNA damage-binding protein 1. | 0.640 |
CKAN_00524300 | CKAN_02123300 | A0A443NE50 | A0A3S3N4B1 | Ubiquitin-conjugating enzyme E2 7; Belongs to the ubiquitin-conjugating enzyme family. | Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family. | 0.682 |
CKAN_00524300 | CKAN_02704200 | A0A443NE50 | A0A3S3PBF6 | Ubiquitin-conjugating enzyme E2 7; Belongs to the ubiquitin-conjugating enzyme family. | E3 ubiquitin-protein ligase PRT1-like protein. | 0.773 |
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