Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00017800 | CKAN_01131400 | A0A443N0C8 | A0A443NVL8 | Pentatricopeptide repeat-containing protein, mitochondrial isoform X1. | Transcription termination factor MTERF2, chloroplastic isoform X2. | 0.423 |
CKAN_00017800 | CKAN_01603900 | A0A443N0C8 | A0A3S3N2N6 | Pentatricopeptide repeat-containing protein, mitochondrial isoform X1. | RAP domain-containing protein, chloroplastic. | 0.490 |
CKAN_00389800 | CKAN_00515100 | A0A3S3PXU2 | A0A443NDU6 | Pentatricopeptide repeat-containing protein, chloroplastic. | Protein plastid transcriptionally active 16, chloroplastic. | 0.531 |
CKAN_00389800 | CKAN_00757200 | A0A3S3PXU2 | A0A443NKG5 | Pentatricopeptide repeat-containing protein, chloroplastic. | WEB family. | 0.466 |
CKAN_00389800 | CKAN_00945600 | A0A3S3PXU2 | A0A3S3Q8R4 | Pentatricopeptide repeat-containing protein, chloroplastic. | Uncharacterized protein. | 0.406 |
CKAN_00389800 | CKAN_01131400 | A0A3S3PXU2 | A0A443NVL8 | Pentatricopeptide repeat-containing protein, chloroplastic. | Transcription termination factor MTERF2, chloroplastic isoform X2. | 0.612 |
CKAN_00389800 | CKAN_01603900 | A0A3S3PXU2 | A0A3S3N2N6 | Pentatricopeptide repeat-containing protein, chloroplastic. | RAP domain-containing protein, chloroplastic. | 0.522 |
CKAN_00389800 | CKAN_02155100 | A0A3S3PXU2 | A0A443PNI7 | Pentatricopeptide repeat-containing protein, chloroplastic. | Protein MID1-COMPLEMENTING ACTIVITY 1-like protein. | 0.523 |
CKAN_00515100 | CKAN_00389800 | A0A443NDU6 | A0A3S3PXU2 | Protein plastid transcriptionally active 16, chloroplastic. | Pentatricopeptide repeat-containing protein, chloroplastic. | 0.531 |
CKAN_00515100 | CKAN_00945600 | A0A443NDU6 | A0A3S3Q8R4 | Protein plastid transcriptionally active 16, chloroplastic. | Uncharacterized protein. | 0.473 |
CKAN_00515100 | CKAN_00994600 | A0A443NDU6 | A0A443NRW8 | Protein plastid transcriptionally active 16, chloroplastic. | Sorting nexin 2A-like protein. | 0.493 |
CKAN_00515100 | CKAN_01603900 | A0A443NDU6 | A0A3S3N2N6 | Protein plastid transcriptionally active 16, chloroplastic. | RAP domain-containing protein, chloroplastic. | 0.503 |
CKAN_00603200 | CKAN_01603900 | A0A3S3MYX6 | A0A3S3N2N6 | Argonaute/Dicer protein; Belongs to the argonaute family. | RAP domain-containing protein, chloroplastic. | 0.414 |
CKAN_00757200 | CKAN_00389800 | A0A443NKG5 | A0A3S3PXU2 | WEB family. | Pentatricopeptide repeat-containing protein, chloroplastic. | 0.466 |
CKAN_00757200 | CKAN_01603900 | A0A443NKG5 | A0A3S3N2N6 | WEB family. | RAP domain-containing protein, chloroplastic. | 0.470 |
CKAN_00945600 | CKAN_00389800 | A0A3S3Q8R4 | A0A3S3PXU2 | Uncharacterized protein. | Pentatricopeptide repeat-containing protein, chloroplastic. | 0.406 |
CKAN_00945600 | CKAN_00515100 | A0A3S3Q8R4 | A0A443NDU6 | Uncharacterized protein. | Protein plastid transcriptionally active 16, chloroplastic. | 0.473 |
CKAN_00945600 | CKAN_00994600 | A0A3S3Q8R4 | A0A443NRW8 | Uncharacterized protein. | Sorting nexin 2A-like protein. | 0.443 |
CKAN_00945600 | CKAN_01603900 | A0A3S3Q8R4 | A0A3S3N2N6 | Uncharacterized protein. | RAP domain-containing protein, chloroplastic. | 0.450 |
CKAN_00994600 | CKAN_00515100 | A0A443NRW8 | A0A443NDU6 | Sorting nexin 2A-like protein. | Protein plastid transcriptionally active 16, chloroplastic. | 0.493 |
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