STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01643800Flavin-containing monooxygenase. (484 aa)    
Predicted Functional Partners:
CKAN_01285900
Outer envelope protein 64, mitochondrial.
    
 0.780
CKAN_01202100
Translocon at the outer membrane of chloroplasts 64.
    
 0.780
CKAN_01202500
Outer envelope protein 64, chloroplastic-like protein.
    
 0.780
COQ3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
    
 0.698
CKAN_00543500
Magnesium protoporphyrin IX methyltransferase, chloroplastic.
    
 0.698
CKAN_00638200
NADPH:adrenodoxin oxidoreductase, mitochondrial.
     
 0.602
CKAN_02523600
Aldehyde dehydrogenase family 7 member A1; Belongs to the aldehyde dehydrogenase family.
  
 
 0.594
CKAN_00436200
Myb/SANT-like domain-containing protein.
  
 
  0.578
CKAN_01410600
Uricase-2 isozyme 2-like protein.
    
  0.578
CKAN_01564100
Transthyretin-like S-allantoin synthase protein.
  
 
  0.578
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.