Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00500300 | CKAN_00861000 | A0A3S4NFJ1 | A0A3S3N3D9 | DNA-directed DNA polymerase. | Putative DNA primase large subunit. | 0.993 |
CKAN_00500300 | CKAN_01436800 | A0A3S4NFJ1 | A0A443P410 | DNA-directed DNA polymerase. | DNA polymerase. | 0.784 |
CKAN_00500300 | CKAN_01525500 | A0A3S4NFJ1 | A0A3S3N190 | DNA-directed DNA polymerase. | DNA helicase; Belongs to the MCM family. | 0.978 |
CKAN_00500300 | CKAN_02200600 | A0A3S4NFJ1 | A0A443PPX9 | DNA-directed DNA polymerase. | DNA polymerase. | 0.917 |
CKAN_00500300 | CKAN_02288300 | A0A3S4NFJ1 | A0A3S3NJW8 | DNA-directed DNA polymerase. | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | 0.876 |
CKAN_00500300 | CKAN_02529700 | A0A3S4NFJ1 | A0A443PYU8 | DNA-directed DNA polymerase. | DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. | 0.992 |
CKAN_00500300 | CKAN_02587700 | A0A3S4NFJ1 | A0A3S3NC85 | DNA-directed DNA polymerase. | DNA primase; Belongs to the eukaryotic-type primase small subunit family. | 0.984 |
CKAN_00500300 | CKAN_02631500 | A0A3S4NFJ1 | A0A443Q1K9 | DNA-directed DNA polymerase. | DNA polymerase alpha subunit B. | 0.985 |
CKAN_00500300 | CKAN_02657900 | A0A3S4NFJ1 | A0A3S3N7A0 | DNA-directed DNA polymerase. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.917 |
CKAN_00500300 | MCM7 | A0A3S4NFJ1 | A0A3S3NL14 | DNA-directed DNA polymerase. | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] | 0.971 |
CKAN_00861000 | CKAN_00500300 | A0A3S3N3D9 | A0A3S4NFJ1 | Putative DNA primase large subunit. | DNA-directed DNA polymerase. | 0.993 |
CKAN_00861000 | CKAN_01436800 | A0A3S3N3D9 | A0A443P410 | Putative DNA primase large subunit. | DNA polymerase. | 0.999 |
CKAN_00861000 | CKAN_01525500 | A0A3S3N3D9 | A0A3S3N190 | Putative DNA primase large subunit. | DNA helicase; Belongs to the MCM family. | 0.987 |
CKAN_00861000 | CKAN_02200600 | A0A3S3N3D9 | A0A443PPX9 | Putative DNA primase large subunit. | DNA polymerase. | 0.993 |
CKAN_00861000 | CKAN_02288300 | A0A3S3N3D9 | A0A3S3NJW8 | Putative DNA primase large subunit. | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | 0.985 |
CKAN_00861000 | CKAN_02529700 | A0A3S3N3D9 | A0A443PYU8 | Putative DNA primase large subunit. | DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. | 0.986 |
CKAN_00861000 | CKAN_02587700 | A0A3S3N3D9 | A0A3S3NC85 | Putative DNA primase large subunit. | DNA primase; Belongs to the eukaryotic-type primase small subunit family. | 0.999 |
CKAN_00861000 | CKAN_02631500 | A0A3S3N3D9 | A0A443Q1K9 | Putative DNA primase large subunit. | DNA polymerase alpha subunit B. | 0.999 |
CKAN_00861000 | CKAN_02657900 | A0A3S3N3D9 | A0A3S3N7A0 | Putative DNA primase large subunit. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.997 |
CKAN_00861000 | MCM7 | A0A3S3N3D9 | A0A3S3NL14 | Putative DNA primase large subunit. | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] | 0.985 |
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