STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00879600Serine-threonine kinase. (249 aa)    
Predicted Functional Partners:
CKAN_00635600
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein isoform X1.
   
 0.955
CKAN_02325800
Phosphoglucan phosphatase LSF1, chloroplastic isoform X1.
    
 0.845
CKAN_02113400
Phosphoglucan phosphatase DSP4, amyloplastic isoform X1.
    
 0.845
CKAN_02434800
Calcineurin B-like protein 3.
    
 0.699
CKAN_00755900
WD40 repeat.
    
 0.672
CKAN_01632100
Calcineurin B-like protein 1 isoform X1.
    
 0.646
CKAN_01599300
CBS domain-containing protein.
   
 0.642
CKAN_01714100
EF-hand domain-containing protein.
    
 0.614
CKAN_02246400
Putative calcium-binding protein CML20.
    
 0.614
CKAN_02282800
EF-hand domain-containing protein.
    
 0.614
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.