STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02474800C-terminal S-isoprenylcysteine carboxyl O-methyltransferase. (388 aa)    
Predicted Functional Partners:
CKAN_02572300
Bifunctional riboflavin kinase/FMN phosphatase-like protein.
     
 0.981
CKAN_00909200
HAD hydrolase.
     
 0.921
CKAN_01220500
CAAX prenyl protease 2 isoform X1.
   
 0.916
CKAN_00956100
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
    
 0.911
CKAN_01464300
Sulfurtransferase.
    
  0.857
CKAN_00347200
Purple acid phosphatase.
    
  0.842
CKAN_00793100
FAD synthetase, chloroplastic.
     
 0.839
CKAN_00286200
Protease HtpX.
    
 0.806
CKAN_01555000
Peptidase M48.
    
 0.806
CKAN_02513900
Homocysteine S-methyltransferase.
    
 0.789
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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