STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00943000Shaggy-related protein kinase epsilon isoform X1; Belongs to the protein kinase superfamily. (439 aa)    
Predicted Functional Partners:
CKAN_00635600
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein isoform X1.
   
 0.952
CKAN_02248600
Timeless protein.
    
 0.794
CKAN_00055000
BES1/BZR1 protein 2.
     
 0.776
CKAN_00551300
Uridine-cytidine kinase C.
    
 0.772
CKAN_00452000
Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY.
   
 0.742
CKAN_00791200
Uridine kinase; Belongs to the uridine kinase family.
    
 0.723
CKAN_01622500
Phosphoribulokinase.
    
 0.723
CKAN_01601100
Uridine kinase; Belongs to the uridine kinase family.
    
 0.723
CKAN_00334600
P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1.
    
 0.723
CKAN_00349300
Phosphoribulokinase.
    
 0.723
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
Server load: low (30%) [HD]