STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00097300Citrate synthase; Belongs to the citrate synthase family. (473 aa)    
Predicted Functional Partners:
CKAN_02379700
ATP-citrate synthase alpha chain protein 2.
  
 0.986
CKAN_01256900
Malate synthase; Belongs to the malate synthase family.
  
 0.984
CKAN_00142700
Acetyl-coenzyme A synthetase.
  
 0.983
CKAN_01445800
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
  
 0.983
CKAN_02158800
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 0.979
CKAN_00287600
UPF0235 protein isoform X1.
    
   0.979
CKAN_02450900
ATP-citrate synthase alpha chain protein 2.
  
 0.974
CKAN_01748000
Putative aconitate hydratase, cytoplasmic.
  
 0.973
CKAN_00783300
Aconitate hydratase, cytoplasmic.
  
 0.973
CKAN_00018200
2,3-dimethylmalate lyase.
  
 0.970
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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