STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02533700Protein VAC14. (721 aa)    
Predicted Functional Partners:
CKAN_02200000
Phosphoinositide phosphatase SAC1 isoform X1.
    
 0.931
CKAN_02519800
Phosphoinositide phosphatase SAC3-like protein isoform X2.
    
 0.928
CKAN_00801800
Phosphoinositide phosphatase SAC3-like protein isoform X1.
    
 0.928
CKAN_01419200
1-phosphatidylinositol-3-phosphate 5-kinase FAB1A-like protein.
    
 0.917
CKAN_00801100
1-phosphatidylinositol-3-phosphate 5-kinase FAB1B.
    
 0.916
CKAN_00463700
1-phosphatidylinositol-3-phosphate 5-kinase FAB1B.
    
 0.916
CKAN_02521200
1-phosphatidylinositol-3-phosphate 5-kinase FAB1B.
    
 0.916
CKAN_01914300
Protein CHROMATIN REMODELING 25.
 
  
   0.724
CKAN_00378000
WD40 repeat.
    
 
 0.527
CKAN_02774300
WD40 repeat.
    
 
 0.527
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.