STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02171900CDPK-related kinase 5. (597 aa)    
Predicted Functional Partners:
CKAN_00504600
Serine/threonine-protein phosphatase.
    
 0.777
CKAN_02467900
Serine/threonine-protein phosphatase.
    
 0.777
CKAN_00635600
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein isoform X1.
   
0.649
CKAN_00046700
Dual specificity phosphatase Cdc25.
    
 0.529
CKAN_00602200
Protein GIGANTEA.
    
 0.527
CKAN_01017500
Serine/threonine-protein kinase GRIK1; Belongs to the protein kinase superfamily.
  
 
0.518
CKAN_02608200
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
0.512
CKAN_00810000
Serine/threonine-protein kinase GRIK2-like protein; Belongs to the protein kinase superfamily.
  
 
0.504
CKAN_02193600
Mitotic spindle checkpoint protein MAD1 isoform X1.
    
 0.492
CKAN_01378600
Phosphatidylinositol 3-/4-kinase; Belongs to the PI3/PI4-kinase family.
    
 0.491
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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