STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01486300Protein FAR1-RELATED SEQUENCE 2 isoform X2. (719 aa)    
Predicted Functional Partners:
CKAN_02526800
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.910
CKAN_02149800
Transformation/transcription domain-containing protein; Belongs to the PI3/PI4-kinase family.
   
 0.870
CKAN_02382900
SWR1-complex protein 4.
   
 0.850
CKAN_00073600
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.797
CKAN_01123100
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.797
CKAN_01316800
Actin-related protein 4; Belongs to the actin family.
    
 0.788
CKAN_02287500
TATA box binding protein associated factor TAF.
   
 0.778
CKAN_01317400
PAH domain-containing protein/Sin3_corepress domain-containing protein.
   
 
 0.712
CKAN_02015000
Paired amphipathic helix protein Sin3-like protein 4 isoform X1.
   
 
 0.712
CKAN_02509100
Enhancer of polycomb-like protein.
    
 0.690
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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