STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01062000Uncharacterized protein. (301 aa)    
Predicted Functional Partners:
CKAN_02115100
Associate of Myc 1.
    
 
 0.745
CKAN_02559600
DNA-directed RNA polymerase III subunit RPC3.
    
   0.731
CKAN_00620300
Calpain-type cysteine protease DEK1; Belongs to the peptidase C2 family.
    
 
 0.690
CKAN_02329000
Protein WVD2-like protein 7 isoform X1.
    
 
 0.690
CKAN_00318500
Guanylate kinase 2, chloroplastic/mitochondrial.
    
 
 0.673
CKAN_01155600
Guanylate kinase 2-like protein.
    
 
 0.673
CKAN_01297300
Multiple organellar RNA editing factor 3, mitochondrial.
    
 
 0.673
CKAN_01371400
Multiple organellar RNA editing factor 3, mitochondrial.
    
 
 0.673
CKAN_00814200
Dihydropyrimidine dehydrogenase NADP+, chloroplastic.
   
 
  0.662
CKAN_01649800
Enolase.
    
   0.461
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.