STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00227500Uncharacterized protein. (171 aa)    
Predicted Functional Partners:
CKAN_01891300
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 0.981
CKAN_02638900
Actin-related protein 3-like protein isoform X2; Belongs to the actin family.
   
 0.795
CKAN_00993600
Sel1-like protein.
   
 0.795
CKAN_01246100
Actin-related protein 3-like protein isoform X2; Belongs to the actin family.
   
 0.795
CKAN_01442600
Actin-interacting protein 1-2-like protein.
   
 
 0.787
CKAN_00281300
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
   
 0.757
CKAN_00854400
Vacuolar protein sorting-associated protein 45 isoform X1; Belongs to the STXBP/unc-18/SEC1 family.
   
   0.750
CKAN_00164300
Actin-related protein 6 isoform X1; Belongs to the actin family.
   
 0.737
CKAN_01774900
Actin-related protein 7; Belongs to the actin family.
   
 0.737
CKAN_00284000
Reversibly glycosylated polypeptide family.
   
 0.737
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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