STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01861900Formin-E isoform X3. (352 aa)    
Predicted Functional Partners:
CKAN_01922000
Eukaryotic translation initiation factor 5B.
    
 0.965
CKAN_00067300
Coiled-coil domain-containing protein 25.
    
 0.965
CKAN_00168000
Coiled-coil domain-containing protein 25.
    
 0.965
CKAN_01169600
Exocyst complex component SEC6 isoform X1.
    
 0.744
CKAN_01439000
DDT domain-containing protein.
   
 
 0.742
CKAN_02463600
Cell cycle checkpoint control protein RAD9A isoform X2; Belongs to the rad9 family.
   
 
 0.742
CKAN_00563000
Ketose-bisphosphate aldolase.
   
  
 0.726
CKAN_01749400
Sec8 exocyst complex component specific domain-containing protein.
     
 0.716
CKAN_00241600
Exocyst complex component SEC3A isoform X1.
     
 0.707
CKAN_01004100
Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
     
 0.702
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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