STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02308400Serine/threonine-protein phosphatase 7. (511 aa)    
Predicted Functional Partners:
CKAN_02664100
Uncharacterized protein.
   
 0.974
CKAN_01139200
Myosin-3-like protein isoform X2.
   
 0.974
CKAN_00046600
Lactoylglutathione lyase isoform X1.
    
 0.840
CKAN_00964500
D-2-hydroxyglutarate dehydrogenase, mitochondrial.
   
 
  0.791
CKAN_02101200
Serine racemase.
   
 
  0.790
CKAN_00771400
Threonine dehydratase.
   
 
  0.790
CKAN_01748300
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
    
 0.623
CKAN_00174800
Putative lactoylglutathione lyase, chloroplastic.
    
 0.623
CKAN_01161200
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
    
 0.623
CKAN_01143800
Ceramide glucosyltransferase.
   
 
  0.616
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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