STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02329600Uncharacterized protein. (1089 aa)    
Predicted Functional Partners:
CKAN_01694300
Protein SPIRRIG-like protein isoform X1.
   
 
 0.902
CKAN_00880200
Protein SPIRRIG-like protein isoform X1.
   
 
 0.902
CKAN_01451900
Phox domain-containing protein.
 
  
 0.884
CKAN_00830200
UV radiation resistance-associated protein isoform X1.
    
 0.872
CKAN_00830900
UV radiation resistance protein/autophagy-related protein 14.
    
 0.872
CKAN_00830300
UV radiation resistance-associated protein isoform X1.
    
 0.872
CKAN_00831000
UV radiation resistance-associated protein isoform X1.
    
 0.872
CKAN_00831100
UV radiation resistance protein/autophagy-related protein 14.
    
 0.872
CKAN_00854400
Vacuolar protein sorting-associated protein 45 isoform X1; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.801
CKAN_01378600
Phosphatidylinositol 3-/4-kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.793
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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