STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02354200Dentin sialophosphoprotein isoform X2. (873 aa)    
Predicted Functional Partners:
CKAN_00599000
Pre-mRNA-splicing factor 38.
   
 0.978
CKAN_00228700
Protein CROWDED NUCLEI 4.
    
  0.964
CKAN_01654500
Suppressor of mec-8 and unc-52 protein 1.
    
 0.949
CKAN_01593100
Sm-like protein LSM7.
   
 0.948
CKAN_01412900
Sm-like protein LSM3A.
   
 0.944
CKAN_01908300
Zinc finger protein ZOP1.
   
 0.943
CKAN_01205500
Nop domain-containing protein.
   
 0.941
CKAN_01087300
Micro-fibrillar-associated protein 1.
   
 0.937
CKAN_01427300
Micro-fibrillar-associated protein 1.
   
 0.937
CKAN_00536100
Micro-fibrillar-associated protein 1.
   
 0.937
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.