STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_01147100Putative caffeoyl-CoA O-methyltransferase. (245 aa)    
Predicted Functional Partners:
CKAN_01300900
4-coumarate--CoA ligase-like protein 1.
  
 0.794
CKAN_00795300
4-coumarate--CoA ligase-like protein 7.
   
 0.793
CKAN_00025300
AMP-dependent synthetase and ligase family protein.
   
 0.792
CKAN_00007600
Thymidine kinase a-like protein; Belongs to the thymidine kinase family.
  
 
  0.788
CKAN_02671900
Chalcone synthase 1; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
    
 0.763
CKAN_00480400
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 
 0.748
CKAN_00791200
Uridine kinase; Belongs to the uridine kinase family.
  
 
  0.748
CKAN_00551300
Uridine-cytidine kinase C.
  
 
  0.748
CKAN_01622500
Phosphoribulokinase.
  
 
  0.748
CKAN_02379600
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 
 0.748
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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