STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_0248390011-S seed storage protein. (323 aa)    
Predicted Functional Partners:
CKAN_00878700
ATP-dependent DNA helicase RecQ-like protein.
  
 0.948
CKAN_02054700
DNA repair protein XRCC3.
  
 
 0.942
CKAN_01647600
DNA repair protein RAD51 3 isoform X1.
  
 0.916
CKAN_01648200
DNA repair protein RAD51 3 isoform X1.
  
 0.916
CKAN_00996200
Protein BREAST CANCER SUSCEPTIBILITY 2 B-like protein isoform X1.
   
 0.915
CKAN_02660600
Protein BREAST CANCER SUSCEPTIBILITY 2 B-like protein isoform X1.
   
 0.915
CKAN_00303400
ERCC4 domain-containing protein.
   
 0.903
CKAN_01433600
DNA repair protein XRCC2 isoform X1.
   
 0.897
CKAN_01434000
DNA repair protein XRCC2 isoform X1.
   
 0.897
CKAN_00879400
Meiotic recombination DMC1; Belongs to the RecA family.
  
0.884
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.