Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00045700 | CKAN_00571200 | A0A443N136 | A0A3S3MP83 | AUGMIN subunit 3 isoform X2. | Cytoskeletal protein Sojo-like protein. | 0.768 |
CKAN_00045700 | CKAN_00571400 | A0A443N136 | A0A443NFF6 | AUGMIN subunit 3 isoform X2. | SNAP25 protein SNAP33-like protein. | 0.768 |
CKAN_00045700 | CKAN_01194300 | A0A443N136 | A0A3S3QCJ9 | AUGMIN subunit 3 isoform X2. | SNAP25 protein SNAP33-like protein. | 0.768 |
CKAN_00045700 | CKAN_01254700 | A0A443N136 | A0A3S3N1P9 | AUGMIN subunit 3 isoform X2. | AUGMIN subunit 6-like protein. | 0.982 |
CKAN_00045700 | CKAN_01968700 | A0A443N136 | A0A3S3MVE6 | AUGMIN subunit 3 isoform X2. | AUGMIN subunit 4. | 0.879 |
CKAN_00045700 | CKAN_02060200 | A0A443N136 | A0A3S3NAM3 | AUGMIN subunit 3 isoform X2. | HAUS augmin-like protein complex subunit 1. | 0.992 |
CKAN_00045700 | CKAN_02243100 | A0A443N136 | A0A3S4PPI1 | AUGMIN subunit 3 isoform X2. | Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. | 0.792 |
CKAN_00045700 | CKAN_02632800 | A0A443N136 | A0A443Q1M5 | AUGMIN subunit 3 isoform X2. | AUGMIN subunit 6-like protein. | 0.982 |
CKAN_00571200 | CKAN_00045700 | A0A3S3MP83 | A0A443N136 | Cytoskeletal protein Sojo-like protein. | AUGMIN subunit 3 isoform X2. | 0.768 |
CKAN_00571200 | CKAN_01254700 | A0A3S3MP83 | A0A3S3N1P9 | Cytoskeletal protein Sojo-like protein. | AUGMIN subunit 6-like protein. | 0.717 |
CKAN_00571200 | CKAN_02060200 | A0A3S3MP83 | A0A3S3NAM3 | Cytoskeletal protein Sojo-like protein. | HAUS augmin-like protein complex subunit 1. | 0.833 |
CKAN_00571200 | CKAN_02632800 | A0A3S3MP83 | A0A443Q1M5 | Cytoskeletal protein Sojo-like protein. | AUGMIN subunit 6-like protein. | 0.717 |
CKAN_00571400 | CKAN_00045700 | A0A443NFF6 | A0A443N136 | SNAP25 protein SNAP33-like protein. | AUGMIN subunit 3 isoform X2. | 0.768 |
CKAN_00571400 | CKAN_01254700 | A0A443NFF6 | A0A3S3N1P9 | SNAP25 protein SNAP33-like protein. | AUGMIN subunit 6-like protein. | 0.717 |
CKAN_00571400 | CKAN_02060200 | A0A443NFF6 | A0A3S3NAM3 | SNAP25 protein SNAP33-like protein. | HAUS augmin-like protein complex subunit 1. | 0.833 |
CKAN_00571400 | CKAN_02632800 | A0A443NFF6 | A0A443Q1M5 | SNAP25 protein SNAP33-like protein. | AUGMIN subunit 6-like protein. | 0.717 |
CKAN_01194300 | CKAN_00045700 | A0A3S3QCJ9 | A0A443N136 | SNAP25 protein SNAP33-like protein. | AUGMIN subunit 3 isoform X2. | 0.768 |
CKAN_01194300 | CKAN_01254700 | A0A3S3QCJ9 | A0A3S3N1P9 | SNAP25 protein SNAP33-like protein. | AUGMIN subunit 6-like protein. | 0.717 |
CKAN_01194300 | CKAN_02060200 | A0A3S3QCJ9 | A0A3S3NAM3 | SNAP25 protein SNAP33-like protein. | HAUS augmin-like protein complex subunit 1. | 0.833 |
CKAN_01194300 | CKAN_02632800 | A0A3S3QCJ9 | A0A443Q1M5 | SNAP25 protein SNAP33-like protein. | AUGMIN subunit 6-like protein. | 0.717 |
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